and Systems Biology
University of Pittsburgh
3501 Fifth Avenue
3064 Biomedical Science Tower 3
Pittsburgh PA 15260
Email: shf28 AT pitt DOT edu
Ph (O): (412) 383 7475
Fax: (412) 648 3163
Faculty listing: csb at pitt
Research Assistant Professor
Department of Computational and Systems Biology
University of Pittsburgh , Pittsburgh, PA
PhD (Dec 2010)
Electrical Engineering (Minor: Mathematics)
The University of Arizona, Tucson, AZ
Sampling and scrambling in compressive sensing based spectral domain optical coherence tomography, JTu2A.7, CLEO (2020).
S. Uttam, A. M. Stern, S. Furman, F. Pullara, D. Spagnolo, L. Nguyen, A. H Gough, C. Sevinsky, F. Ginty, D. L. Taylor, S. C. Chennubhotla,
A spatial analytics computational and systems biology platform predicts risk of colorectal cancer recurrence and identifies emergent spatial domain networks associated with recurrence, (2019). [Under Review, bioRxiv 635730]
S. Uttam, J. G. Hashash, J. LaFace, D. Binion, M. Regueiro, D. J. Hartman, R. E. Brand, and Y. Liu,
Three-dimensional nanoscale nuclear architecture mapping detects the presence of colorectal neoplasia in patients with inflammatory bowel disease colitis from rectal biopsies, Cancer Prev Res,12(8) 527-538 (2019). [link]
It was invited to be featured on the cover of the August 1, 2019 issue of Cancer Prevention Research (AACR).
S. Uttam and Y. Liu
Three-dimensional nanoscale nuclear architecture mapping for improved cancer risk stratification, SPIE/OSA European Conferences on Biomedical Optics (ECBO) 2019, 23-27 June 2019, Munich, Germany; Paper 11076-38 (2019).
E. Fouquerel, R. Barnes, S. Uttam, S. Watkins, M. Bruchez, and P. L. Opresko,
Chronic oxidative guanine base damage at telomeres induces telomere crisis, Molecular Cell; 75(1): 117-130 (2019).
S. Uttam, A.M. Stern, S. A. Furman, F. Pullara, F. Ginty, D. L. Taylor, S. C. Chennubhotla,
Spatial proteomics with hyperplexed fluorescence imaging predicts risk of colorectal cancer recurrence and infers recurrence-specific protein-protein networks. Cancer Res; 79 (13 Supplement): 1642 (2019). [AACR Annual Meeting 2019, March 29-April 3 2019, Atlanta, Georgia].
J. Xu, H. Ma, J. Jin, S. Uttam, R. Fu, Y. Huang, and Y. Liu, “Super-resolution imaging of higher-order chromatin structures at different epigenetic states in single mammalian cells,” Cell Reports; 24(4): 873-882 (2018).