#!/bin/csh -f # # NMRPipe System Environment script, Tue Feb 14 00:01:37 EST 2006. #PW customized for BASH usage export NMRBASE=/opt/nmrpipe # # NMRPipe I/O Optimization. # These settings may improve NMRPipe pipeline performance: export NMR_IO_TIMEOUT=0 export NMR_IO_SELECT=0 export NMR_AUTOSWAP=1 alias u='chmod a+rx *.com *.tcl' #set history = 256 #alias h 'history' #alias rm 'rm -i' #alias cd 'cd \!*; set prompt = "$cwd% "' #alias dirs 'ls -l | egrep -e ^d' #alias links 'ls -l | egrep -e ^l' export MANPATH=$MANPATH:$NMRBASE/man:/usr/share/man:/usr/local/man export PATH=$PATH":.:$NMRBASE/nmrbin.linux9:$NMRBASE/com" export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$NMRBASE/xview/linux9/lib:/usr/openwin/lib:$NMRBASE/nmrbin.linux9/lib:/usr/local/lib #if (!($?OPENWINHOME)) then # if (-d $NMRBASE/nmrbin.linux9/openwin) then # export OPENWINHOME=$NMRBASE/nmrbin.linux9/openwin # endif #fi export OPENWINHOME=$NMRBASE/nmrbin.linux9/openwin export NMRCHECK=ALL export NMRTXT=$NMRBASE/nmrtxt export NMRBIN=$NMRBASE/nmrbin.linux9 export TCLPATH=$NMRBASE/com export TALOS_DIR=$NMRBASE/talos export NMR_TCLTK8=TRUE if (($NMR_TCLTK8==TRUE)) then export TCL_LIBRARY=$NMRBASE/nmrtcl/tcl8.4 export TK_LIBRARY=$NMRBASE/nmrtcl/tk8.4 export BLT_LIBRARY=$NMRBASE/nmrtcl/blt2.4z export NMRPIPE_TCL_LIB=$NMRBASE/nmrtcl/tcl8.4 export NMRPIPE_TK_LIB=$NMRBASE/nmrtcl/tk8.4 export NMRPIPE_BLT_LIB=$NMRBASE/nmrtcl/blt2.4z else export TCL_LIBRARY=$NMRBASE/nmrtcl/tcl7.6 export TK_LIBRARY=$NMRBASE/nmrtcl/tk4.2 export BLT_LIBRARY=$NMRBASE/nmrtcl/blt2.4 export NMRPIPE_TCL_LIB=$NMRBASE/nmrtcl/tcl7.6 export NMRPIPE_TK_LIB=$NMRBASE/nmrtcl/tk4.2 export NMRPIPE_BLT_LIB=$NMRBASE/nmrtcl/blt2.4 fi