Publications

  1. Elgin, S.C.R., Alvarez, C., Bednarski, A., Dunbar, D., Reinke, C., Wolyniak, M., Bailey, C., Barnard, D., Bazinet, C., Beach, D., Bedard, J.E.J., Bhalla, S., Braverman, J.M., Burg, M., Chandrasekaran, V., Chung, H-M., Clase, K., DeJong, R.J., DiAngelo, J., Du, C., Eckdahl, T., Eisler, H.L., Emerson, J., Frary, A., Frohlich, D., Goodman, A., Gosser, Y., Govind, S., Haberman, A., Hark, A., Hauser, C., Hoogewerf, A., Hoopes, L., Howell, C., Johnson, D., Jones, C.J., Kadlec, L., Kaehler, M., Silver-Key, C., Kleinschmit, A., Kokan, N., Kuleck, G., Leatherman, J., Lopilato, J., MacKinnon, C., Martinez-Cruzado, J.C., McNeil, G.P., Mel, S., Nagengast, A., Overvoorde, P., Paetkau, D.W., Parrish, S., Peterson, C.N., Preuss, M., Reed, L., Revie, D., Robic, S., Roecklien-Canfield, J.A., Rosenwald, A., Rubin, M.R., Saville, K., Schroeder, S.C., Sharif, K.A., Shaw, M., Skuse, G., Smith, C., Smith, M.A., Smith, S., Spana, E., Spratt, M., Sreenivasan, A., Stamm, J., Szauter, P., Thompson, J.S., Wawersik, M., Youngblom, J., Zhou, L., Mardis, E., Buhler, J., Leung, W., Shaffer, C., Loppatto, D., (2013), "The Genomics Education Partnership: A Collaborative Research Experience for Undergraduates That Enables Student-generated Annotations of Eukaryotic Genomes", submitted for publication.
  2. Zhou, L., Watzlaf, V., Abdelhak, M. (2013), "Flexible Approaches for Teaching Computational Genomics in a Health Information Management Program", Perspectives in Health Information Management, in press.
  3. Yenerall, P. and Zhou, L. (2012) "Identifying the Mechanisms of Intron Gain: Progress and Trends", Biology Direct, 7:29.
  4. Yenerall, P., Krupa, B., Zhou, L. (2011) "Mechanisms of Intron Gain and Loss in Drosophila", BMC Evolutionary Biology, 11:363.
  5. Ludwig, B., Zhou, L., Watzlaf, V., Abdelhak, M. (2010) "Adding a Genomic Healthcare Component to a Health Information Management Curriculum", Perspectives in Health Information Management, 7:1b.
  6. Solovyev, A., Mikheev, M., Zhou, L., Dutta-Moscato, J., Ziraldo, C., An, G., Vodovotz Y. and Mi, Q. (2010) "SPARK: A Framework for Multi-Scale Agent-based Biomedical Modeling", (journal version of the conference paper), International Journal of Agent Technologies and Systems, 2(3): 18-30.
  7. Solovyev, A., Mikheev, M., Zhou, L., Dutta-Moscato, J., Ziraldo, C., An, G., Vodovotz Y. and Mi, Q. (2010) "SPARK: A Framework for Multi-Scale Agent-based Biomedical Modeling", Proceedings of the 2010 Agent-Directed Simulation Symposium (ADS 2010), Society for Modeling and Simulation International (SCS), 135-141. (Orlando, FL, April 12-14).
  8. Zhou, L., Mihai, I. and Florea, L., (2010), "Spaced seeds for cross-species cDNA-to-genome sequence alignment", Communications in Information and Systems, 10(2), 115-136.
  9. Mi, Q., Solovyev, A., Zhou, L., Mikheev, M., Dutta-Moscato, J., An, G., and Vodovotz, Y., (2009), "A computer simulation of pressure ulcer formation following spinal cord injury: An application of a novel agent-based biomedical modeling framework", Proceedings of RESNA 2009 Annual Conference.
  10. Zhou, L., Delcher, A., Pertea, M., and Florea, L., (2009), "Sim4cc - A cross-species spliced alignment tool", Nucl. Acids Res. 37(11):e80; doi: 10.1093/nar/gkp319
  11. Zhou, L., Mihai, I., and Florea, L. (2008) "Effective cluster-based seed design for cross-species sequence comparison". Bioinformatics, 24, 2926-2927.
  12. Zhou, L., Stanton, J. and Florea, L. (2008) "Universal Seeds for cDNA-to-genome comparison", BMC Bioinformatics, 9:36. (Open Access)
  13. Zhou, L. and Florea, L. (2007) "Designing sensitive and specific spaced seeds for cross-species mRNA-to-genome alignment", J. Comput. Biol. 14(2), 113-130.
  14. Zhou, L. and Lee, F. X., (2006), "Spin-3/2 baryons from an anisotropic lattice QCD action", Phys. Rev. D74, 034507.
  15. Lee, F. X., Zhou, L., Wilcox, W., Christensen, J., (2006), "Magnetic polarizability of hadrons from lattice QCD in the background field method", Phys. Rev. D73, 034503.
  16. Lee, F. X., Zhou, L., Wilcox, W., Christensen, J., (2005), "Magnetic polarizability of hadrons in the background field method", PoS., 031.
  17. Lee, F. X., Kelly, R., Zhou, L., Wilcox, W., (2005), "Baryon magnetic moments in the background field method", Phys. Lett. B627, 71-76.
  18. Christensen, J., Wilcox, W., Lee, F. X., Zhou, L., (2005), "Electric polarizability of neutral hadrons from Lattice QCD", Phys. Rev. D72, 034503.
  19. Lee, F. X., Kelly, R., Zhou, L., Wilcox, W., (2004), "Baryon magnetic moments in the external field method", Nucl.Phys.B (Proc.Suppl.) 140:414-416.
  20. Christensen, J., Lee, F. X., Wilcox, W., Zhou, L., (2003), "Electric polarizability of hadrons", Nucl. Phys. B (Proc.Suppl.) 119: 269-271.
  21. Zhou, L., Lee, F. X., Wilcox, W., Christensen, J., (2003), "Magnetic polarizability of hadrons from lattice QCD", Nucl.Phys. B (Proc.Suppl.) 119: 272-274.
  22. Lee, F. X., Leinweber, D. B., Zhou, L., Zanotti, J., Choe, S., (2002), "N* Masses from an anisotropic lattice QCD action", Nucl.Phys. B (Proc.Suppl.) 106: 248-250.
  23. Peng, G.X., Jiang, H.Q., Liu Z.J., Zhou, L., Liu, B., Cheng X.G., Li J.H., (2000), "Charge dependence of the critical density of strange quark matter in a new mass scaling", High Energy Physics and Nuclear Physics, 24(8):732-738.
  24. Zhou, L., Peng, G. X., Ning, P. Z., (1999), "Strange quark matter at finite temperature", Progress in Physics, 19(1): 59-71.
  25. Zhou, L., Peng, G. X., Ning, P. Z., (1999), "On the properties of strange quark matter", High Energy Physics and Nuclear Physics, 23(4): 360-366.