Office: 242 Crawford Hall, University of Pittsburgh
Education: B.S. Computer Science, San Jose State University
Fall 2008: Machine Learning, Comp. Structural Biology, Journal
Spring 2009: Computational Genomics, Cell and Systems Modeling, Laboratory Methods for Computational Biologists, CPCB Journal Club.
Summer 2009: Scientific Ethics
Fall 2009: Macromolecular Structure and Function, Computational Structural Biology
Spring 2010: Algorithms for Computational Structural Biology, Journal Club
Fall 2010: Teaching Assistant for Computational Structural Biology, CPCB Journal Club
Fall 2011: Finite Element Analysis
Spring 2012: High-Throughput Genomic Data Analysis
I grew up in Marin County, California, 20 minutes north of San Francisco. I am in my 5th year working towards a Ph.D. in Computational Biology through a joint program between Carnegie Mellon University and University of Pittsburgh. My primary goal is to someday have a positive impact in medicine and curing disease.
1. Couture, O., Callenberg, K., Koul, N., Pandit, S., Younes, J., Hu, Z-L., Dekkers, J., Reecy, J., Honavar, V., and Tuggle, C. (2009). ANEXdb: An Integrated Animal ANnotation and Microarray EXpression Database. Mammalian Genome. doi:10.1007/s00335-009-9234-1
2. Callenberg, K.M., Choudhary, O.P., De Forest, G., Gohara, D., Baker, N., Grabe, M. (2010). APBSmem: A graphical interface for electrostatics calculations at the membrane. PLoS ONE 5(9): e12722. doi:10.1371/journal.pone.0012722
3. Callenberg, K.M., Latorraca, N.R., Grabe, M. (2012). Membrane bending is critical for the stability of voltage sensor segments in the membrane. J. General Physiology 140 (1): 55. doi: 10.1085/jgp.201110766 PDF
4. Latorraca, N.R. (co-first author), Callenberg, K.M. (co-first author), Boyle, J.P., Grabe, M. (2013). Continuum approaches to understanding ion and peptide interactions with the membrane. BBA - Biomembranes (Submitted)
APBSmem is a graphical interface for performing electrostatics calculations on membrane proteins and other biomolecules in the membrane.
At Iowa State I began work on a database for the storage and analysis of microarray data. ANEXdb is now accepting experiments and data.